@()(implicit session: Session)
@english.home.main("Tools") {

    <style>

        a{
            color:cornflowerblue;
        }

        table thead tr th {
            text-align: center;
        }

        table tbody tr td:first-child{
            font-size: 20px;
            vertical-align: middle;
            text-align: center;
        }

        table tbody tr td:nth-child(3){
            vertical-align: middle;
        }

        table tbody tr td:nth-child(4){
            vertical-align: middle;
            text-align: center;
        }


    </style>

    <hgroup class="page-head">
        <h2><span>Tools</span></h2>
    </hgroup>

            <div id="container" class="clearfix">
                <div id="content" class="full-width">
                    <div style="padding: 10px">
                        <table class="display table table-bordered" id="table">
                            <thead>
                                <tr>
                                    <th>Name</th>
                                    <th>Description</th>
                                    <th>Origin</th>
                                    <th>Version</th>
                                    <th>Author</th>
                                </tr>
                            </thead>
                            <tbody>
                                <tr>
                                    <td><a href="@routes.ToolsController.blastBefore()">Blast</a></td>
                                    <td>BLAST (basic local alignment search tool) is an algorithm for comparing primary
                                        biological sequence information, such as the amino-acid sequences of proteins or
                                        the nucleotides of DNA and/or RNA sequences.</td>
                                    <td><a href="https://blast.ncbi.nlm.nih.gov/Blast.cgi" target="_blank">https://blast.ncbi.nlm.nih.gov/Blast.cgi</a></td>
                                    <td>2.6.0</td>
                                    <td></td>
                                </tr>
                                <tr>
                                    <td><a href="@routes.ToolsController.seqFetchBefore()">Sequences Fetch</a></td>
                                    <td>Samtools is a suite of programs for interacting with high-throughput sequencing data.</td>
                                    <td><a href="https://www.htslib.org/" target="_blank">https://www.htslib.org/</a></td>
                                    <td>0.1.19</td>
                                    <td>Heng Li</td>
                                </tr>
                                <tr>
                                    <td><a href="@routes.ToolsController.muscleBeforeUS()">Muscle</a></td>
                                    <td>MUSCLE is one of the best-performing multiple alignment programs according to
                                        published benchmark tests, with accuracy and speed that are consistently better
                                        than CLUSTALW. MUSCLE can align hundreds of sequences in seconds. Most users
                                        learn everything they need to know about MUSCLE in a few minutes—only a handful
                                        of command-line options are needed to perform common alignment tasks.</td>
                                    <td><a href="http://www.drive5.com/muscle/" target="_blank">http://www.drive5.com/muscle/</a></td>
                                    <td>3.8.31</td>
                                    <td></td>
                                </tr>
                                <tr>
                                    <td><a href="@routes.ToolsController.geneWiseBeforeUS()">Genewise</a></td>
                                    <td>GeneWise compares a protein sequence to a genomic DNA sequence, allowing for
                                        introns and frameshifting errors. </td>
                                    <td></td>
                                    <td>wise2-4-1</td>
                                    <td></td>
                                </tr>

                                <tr>
                                    <td><a href="@routes.ToolsController.lastzBeforeUS()">Lastz</a></td>
                                    <td>This document describes installation and usage of the LASTZ sequence alignment
                                        program. LASTZ is a drop-in replacement for BLASTZ, and is backward compatible
                                        with BLASTZ's command-line syntax. That is, it supports all of BLASTZ's options
                                        but also has additional ones, and may produce slightly different alignment
                                        results. </td>
                                    <td><a href="http://www.bx.psu.edu/miller_lab/dist/README.lastz-1.02.00/_README.lastz-1.02.00.html" target="_blank">
                                        http://www.bx.psu.edu/miller_lab/dist/README.lastz-1.02.00/_README.lastz-1.02.00.html</a></td>
                                    <td>1.02.00</td>
                                    <td>Bob Harris  < rsharris at bx dot psu dot edu> </td>
                                </tr>

                            </tbody>
                        </table>
                    </div>
                </div>
            </div>

    <script>

        $(function () {
            $("#table").bootstrapTable();
        })
    </script>

}